Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18215-201ENSMUST00000204429 798 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm3257-201ENSMUST00000207217 675 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm18871-201ENSMUST00000218655 745 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm19189-201ENSMUST00000221689 754 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 AC107711.2-203ENSMUST00000227827 762 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm5045-201ENSMUST00000027054 810 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Sdc1P18828 Gm8872-201ENSMUST00000197475 1341 ntBASIC3.96□□□□□ -1.77
Sdc1P18828 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
Sdc1P18828 Gm37289-201ENSMUST00000195409 1402 ntBASIC3.96□□□□□ -1.77
Sdc1P18828 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
Sdc1P18828 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Sdc1P18828 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sdc1P18828 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm24272-201ENSMUST00000102329 98 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sdc1P18828 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm24886-201ENSMUST00000104384 123 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm12193-201ENSMUST00000117250 379 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm7657-201ENSMUST00000118851 666 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm15361-201ENSMUST00000119320 444 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm15828-201ENSMUST00000119911 522 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm17014-201ENSMUST00000120765 168 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm5125-201ENSMUST00000148614 624 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm24065-201ENSMUST00000157487 264 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm25387-201ENSMUST00000157813 132 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm6264-201ENSMUST00000160802 624 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm20637-201ENSMUST00000175715 462 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Rab26os-201ENSMUST00000176215 477 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm29610-201ENSMUST00000187749 453 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm9127-201ENSMUST00000188041 985 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm28639-201ENSMUST00000191519 481 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm37517-201ENSMUST00000194004 1289 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm35648-201ENSMUST00000202304 475 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm43968-201ENSMUST00000203388 389 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm44856-201ENSMUST00000206639 304 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm30646-201ENSMUST00000207662 180 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm7688-201ENSMUST00000212857 337 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Sdc1P18828 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 AC160031.1-201ENSMUST00000219914 522 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sdc1P18828 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Sdc1P18828 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm24917-201ENSMUST00000083935 104 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Pramel-201ENSMUST00000118979 1383 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Sdc1P18828 AC139218.1-201ENSMUST00000228215 4287 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Gm38104-201ENSMUST00000195121 1895 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Svet1-201ENSMUST00000209370 3940 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.96□□□□□ -1.78
Sdc1P18828 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Sdc1P18828 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Sdc1P18828 Gm37686-201ENSMUST00000194099 2309 ntBASIC3.95□□□□□ -1.78
Sdc1P18828 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms