Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28353-201ENSMUST00000186482 570 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm28533-201ENSMUST00000186741 570 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm9569-201ENSMUST00000187492 787 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm28389-201ENSMUST00000190090 697 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm37070-201ENSMUST00000193272 460 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm38080-201ENSMUST00000194035 268 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm36954-201ENSMUST00000195362 363 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm45525-201ENSMUST00000210800 389 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Cdx1P18111 CT030238.4-203ENSMUST00000227343 836 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdx1P18111 BC023105-201ENSMUST00000073997 1227 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm24200-201ENSMUST00000082955 157 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Mir331-201ENSMUST00000083673 96 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdx1P18111 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm14679-201ENSMUST00000121536 722 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm14977-201ENSMUST00000121626 812 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm11804-201ENSMUST00000121663 468 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm25227-201ENSMUST00000158204 112 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm27985-201ENSMUST00000185112 378 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm28066-201ENSMUST00000188657 472 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm29376-201ENSMUST00000189357 835 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm43828-201ENSMUST00000196890 639 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm44376-201ENSMUST00000197570 128 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm43554-201ENSMUST00000199987 186 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm44038-201ENSMUST00000203952 889 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm6195-201ENSMUST00000063059 357 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm23407-201ENSMUST00000082538 91 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm25682-201ENSMUST00000083942 164 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdx1P18111 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Cdx1P18111 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Cdx1P18111 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.18□□□□□ -1.74
Cdx1P18111 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Cdx1P18111 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Cdx1P18111 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.18□□□□□ -1.74
Cdx1P18111 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm24886-201ENSMUST00000104384 123 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm11908-201ENSMUST00000117755 347 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm12820-201ENSMUST00000119233 342 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm13677-201ENSMUST00000120739 595 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Gm15877-201ENSMUST00000121897 964 ntBASIC4.17□□□□□ -1.74
Cdx1P18111 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC4.17□□□□□ -1.74
Cdx1P18111 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Cdx1P18111 Scarna6-201ENSMUST00000158656 265 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms