Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col1a1P11087 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Naip3-201ENSMUST00000118082 4208 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm23789-201ENSMUST00000122536 301 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm24371-201ENSMUST00000122662 267 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.62□□□□□ -1.51
Col1a1P11087 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col1a1P11087 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col1a1P11087 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm37636-201ENSMUST00000193583 359 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Gm17956-201ENSMUST00000199931 838 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm44820-201ENSMUST00000207420 396 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col1a1P11087 Gm45857-201ENSMUST00000212207 356 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col1a1P11087 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col1a1P11087 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col1a1P11087 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col1a1P11087 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col1a1P11087 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.62□□□□□ -1.51
Col1a1P11087 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm25595-201ENSMUST00000102273 97 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Gm16394-201ENSMUST00000117289 675 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm26490-201ENSMUST00000157879 140 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Gm22536-201ENSMUST00000158171 134 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm45343-201ENSMUST00000210452 828 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Gm8672-201ENSMUST00000221200 332 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Col1a1P11087 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Col1a1P11087 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col1a1P11087 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.61□□□□□ -1.51
Col1a1P11087 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col1a1P11087 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col1a1P11087 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.61□□□□□ -1.51
Col1a1P11087 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm15385-201ENSMUST00000118725 667 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Gm15603-201ENSMUST00000119252 492 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Gm12041-201ENSMUST00000121606 602 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Gm14122-201ENSMUST00000122076 973 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm9443-201ENSMUST00000188406 816 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.6□□□□□ -1.51
Col1a1P11087 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col1a1P11087 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col1a1P11087 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col1a1P11087 Gm11506-201ENSMUST00000122414 470 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Gm14710-201ENSMUST00000146082 1066 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col1a1P11087 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.59□□□□□ -1.51
Col1a1P11087 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col1a1P11087 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col1a1P11087 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col1a1P11087 Gm25140-201ENSMUST00000083254 140 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col1a1P11087 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.59□□□□□ -1.51
Col1a1P11087 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col1a1P11087 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms