Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb3O54879 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Hmgb3O54879 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm13928-201ENSMUST00000120326 1732 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 AC108802.1-201ENSMUST00000219501 3142 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm24429-201ENSMUST00000104076 132 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm13033-201ENSMUST00000117591 1057 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm16259-201ENSMUST00000145241 553 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm15275-201ENSMUST00000154752 347 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm25152-201ENSMUST00000157117 114 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm24940-201ENSMUST00000158326 108 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm7316-201ENSMUST00000165395 445 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm28967-201ENSMUST00000187351 281 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm29284-201ENSMUST00000188363 255 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm18969-201ENSMUST00000189423 730 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm19087-201ENSMUST00000191430 946 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm37215-201ENSMUST00000194927 1259 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm45032-201ENSMUST00000205375 520 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm6477-201ENSMUST00000217098 764 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 AC154313.1-201ENSMUST00000217755 3841 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC3.87□□□□□ -1.79
Hmgb3O54879 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC3.87□□□□□ -1.79
Hmgb3O54879 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC3.87□□□□□ -1.79
Hmgb3O54879 AC139294.1-201ENSMUST00000226708 571 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 n-R5s204-201ENSMUST00000082972 119 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm22126-201ENSMUST00000083244 142 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Mir215-201ENSMUST00000083628 112 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm14667-201ENSMUST00000119448 1350 ntBASIC3.87□□□□□ -1.79
Hmgb3O54879 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Hmgb3O54879 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm25419-201ENSMUST00000104215 191 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm12423-201ENSMUST00000118334 135 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm15390-201ENSMUST00000120323 738 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm11677-201ENSMUST00000121349 977 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm15428-201ENSMUST00000121352 333 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm12833-201ENSMUST00000136112 477 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm11197-201ENSMUST00000145158 839 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm25865-201ENSMUST00000158247 104 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm26172-201ENSMUST00000158421 134 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm10784-201ENSMUST00000178715 238 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC3.86□□□□□ -1.79
Hmgb3O54879 BX530055.1-201ENSMUST00000197285 122 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm43344-201ENSMUST00000198723 1229 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm6366-201ENSMUST00000198766 826 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm43005-201ENSMUST00000199015 648 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm44879-201ENSMUST00000207007 503 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Hmgb3O54879 AC142273.1-201ENSMUST00000213723 673 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Hmgb3O54879 AC158803.2-201ENSMUST00000219452 679 ntBASIC3.86□□□□□ -1.79
Hmgb3O54879 Gm19189-201ENSMUST00000221689 754 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms