Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm17956-201ENSMUST00000199931 838 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm19201-201ENSMUST00000210127 778 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm25140-201ENSMUST00000083254 140 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 AC154184.1-201ENSMUST00000224375 1620 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc180J3QNE4 Gm43197-201ENSMUST00000201493 2583 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 AC154227.1-201ENSMUST00000228809 2467 ntBASIC8.8□□□□□ -1
Ccdc180J3QNE4 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm7363-201ENSMUST00000119883 399 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm24774-201ENSMUST00000157384 134 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm24944-201ENSMUST00000158330 128 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm22326-201ENSMUST00000158897 351 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm44402-201ENSMUST00000203677 238 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 AC137961.1-201ENSMUST00000227924 734 ntBASIC8.79□□□□□ -1
Ccdc180J3QNE4 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC8.79□□□□□ -1
Ccdc180J3QNE4 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm22493-201ENSMUST00000104494 132 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm22488-201ENSMUST00000116811 127 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm22613-201ENSMUST00000122679 292 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm6155-201ENSMUST00000173735 341 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm28304-201ENSMUST00000185977 312 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm29256-201ENSMUST00000189094 312 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm28484-201ENSMUST00000190606 312 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm37908-201ENSMUST00000195828 470 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm14750-201ENSMUST00000118262 516 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm13220-201ENSMUST00000121535 508 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Gm42955-201ENSMUST00000197355 3393 ntBASIC8.78□□□□□ -1
Ccdc180J3QNE4 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc180J3QNE4 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Ccdc180J3QNE4 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 AC105407.2-201ENSMUST00000223707 3911 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Gm8215-201ENSMUST00000120627 990 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Gm15075-201ENSMUST00000122187 477 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Gm25923-201ENSMUST00000158312 138 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Gm43428-201ENSMUST00000200108 3845 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Synpr-207ENSMUST00000223583 3362 ntBASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Ccdc180J3QNE4 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Gm23743-201ENSMUST00000157389 274 ntBASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Gm44816-201ENSMUST00000206666 477 ntBASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Gm45209-201ENSMUST00000207122 353 ntBASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Mir338-201ENSMUST00000083666 98 ntBASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc180J3QNE4 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms