Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm25877-201ENSMUST00000104326 129 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm11719-201ENSMUST00000119399 351 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm13603-201ENSMUST00000119404 83 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm14766-201ENSMUST00000121689 367 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm25185-201ENSMUST00000157754 96 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm17060-201ENSMUST00000172394 824 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm23631-201ENSMUST00000175291 123 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Mir5107-201ENSMUST00000175586 88 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm27037-201ENSMUST00000182270 960 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm26925-201ENSMUST00000182470 957 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm10136-201ENSMUST00000183196 435 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm7870-201ENSMUST00000184467 616 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm27601-201ENSMUST00000184794 127 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm18969-201ENSMUST00000189423 730 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm37095-201ENSMUST00000195421 205 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm43467-201ENSMUST00000197441 437 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Mir421-201ENSMUST00000083575 76 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm24695-201ENSMUST00000083877 83 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm26108-201ENSMUST00000083973 191 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Naip3-201ENSMUST00000118082 4208 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm22231-201ENSMUST00000101027 73 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm13768-201ENSMUST00000116469 929 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm12492-201ENSMUST00000117665 564 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm23894-201ENSMUST00000158107 313 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm23343-201ENSMUST00000158964 143 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm18953-201ENSMUST00000175694 300 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm21959-201ENSMUST00000178439 452 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm27905-201ENSMUST00000184005 207 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm37774-201ENSMUST00000194401 245 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm29736-201ENSMUST00000198189 385 ntBASIC5.45□□□□□ -1.54
Pcdh1F7BJK1 Gm44463-201ENSMUST00000198895 137 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms