Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm42892-201ENSMUST00000196227 3973 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 AW046200-203ENSMUST00000211787 2479 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm7258-201ENSMUST00000179317 300 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm29408-201ENSMUST00000187536 216 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Srcap-206ENSMUST00000186954 9345 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm5383-201ENSMUST00000121177 617 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm15780-201ENSMUST00000121283 935 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm16026-202ENSMUST00000159695 772 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm5551-201ENSMUST00000199720 690 ntBASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.63□□□□□ -1.67
Col6a3E9PWQ3 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm13469-201ENSMUST00000118231 350 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm14463-201ENSMUST00000121117 498 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm37239-201ENSMUST00000193510 141 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm9119-201ENSMUST00000118866 495 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Mir7k-201ENSMUST00000184115 110 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Gm9245-201ENSMUST00000200528 983 ntBASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a3E9PWQ3 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.61□□□□□ -1.67
Col6a3E9PWQ3 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms