Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm23327-201ENSMUST00000157420 78 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm15838-201ENSMUST00000161575 180 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm6647-201ENSMUST00000170514 641 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm28871-201ENSMUST00000186191 687 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm8891-201ENSMUST00000198546 832 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm23623-201ENSMUST00000082461 107 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm37212-201ENSMUST00000192582 3650 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.72□□□□□ -1.65
Upk3aQ9JKX8 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upk3aQ9JKX8 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Upk3aQ9JKX8 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm14575-201ENSMUST00000117210 560 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm8214-201ENSMUST00000172123 351 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm28196-201ENSMUST00000187719 640 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm37720-201ENSMUST00000195497 1241 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm42694-201ENSMUST00000196951 358 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm20997-201ENSMUST00000205148 231 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm8319-201ENSMUST00000205708 641 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm18850-201ENSMUST00000211578 388 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm19189-201ENSMUST00000221689 754 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Gm25818-201ENSMUST00000083282 164 ntBASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upk3aQ9JKX8 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm12285-201ENSMUST00000117347 233 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm14512-201ENSMUST00000117924 230 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm14576-201ENSMUST00000118073 1111 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm16106-201ENSMUST00000119187 294 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm13132-201ENSMUST00000121194 472 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Gm13430-201ENSMUST00000121366 288 ntBASIC4.7□□□□□ -1.66
Upk3aQ9JKX8 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms