Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 n-R5s173-201ENSMUST00000082620 119 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Vps28Q9D1C8 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm23942-201ENSMUST00000101956 107 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm23593-201ENSMUST00000104309 120 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm12507-201ENSMUST00000119155 415 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm17014-201ENSMUST00000120765 168 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm12413-201ENSMUST00000121508 312 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm13077-201ENSMUST00000121941 484 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm26350-201ENSMUST00000157531 288 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm7335-201ENSMUST00000172475 373 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm26993-201ENSMUST00000182766 789 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm34176-201ENSMUST00000192621 474 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm19030-201ENSMUST00000194947 552 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm44456-201ENSMUST00000196554 89 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm9173-201ENSMUST00000198054 400 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm18482-201ENSMUST00000202405 760 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm40692-201ENSMUST00000220411 491 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 AC159293.2-201ENSMUST00000222289 424 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Vps28Q9D1C8 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.35□□□□□ -1.55
Vps28Q9D1C8 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm24170-201ENSMUST00000104124 133 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm24789-201ENSMUST00000104282 131 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm15061-201ENSMUST00000121076 1046 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm13738-201ENSMUST00000122437 469 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm25271-201ENSMUST00000157273 290 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm43724-201ENSMUST00000197516 226 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm44137-201ENSMUST00000203670 367 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm8319-201ENSMUST00000205708 641 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm45660-201ENSMUST00000210267 151 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm4963-201ENSMUST00000072718 378 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Gm23927-201ENSMUST00000082466 215 ntBASIC5.34□□□□□ -1.55
Vps28Q9D1C8 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms