Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm24160-201ENSMUST00000104594 126 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm15670-201ENSMUST00000117740 447 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm11759-201ENSMUST00000121742 464 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm23883-201ENSMUST00000122686 290 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm16345-201ENSMUST00000146065 158 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm9457-201ENSMUST00000180176 372 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Mir409-201ENSMUST00000198153 79 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm44820-201ENSMUST00000207420 396 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 AC211878.2-201ENSMUST00000222486 488 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Olfr654-201ENSMUST00000098173 1155 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Smc1aQ9CU62 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm22778-201ENSMUST00000104090 128 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm11971-201ENSMUST00000117715 288 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm15772-201ENSMUST00000118533 438 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm3267-201ENSMUST00000118671 473 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm11278-201ENSMUST00000121002 997 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm15057-201ENSMUST00000121516 534 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm25179-201ENSMUST00000122632 128 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm25176-201ENSMUST00000122640 125 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm5353-201ENSMUST00000139800 793 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm22725-201ENSMUST00000158092 110 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm19086-201ENSMUST00000190772 665 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm6261-201ENSMUST00000204707 760 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm44690-201ENSMUST00000207984 382 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm7333-201ENSMUST00000213449 1060 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Gm23626-201ENSMUST00000082458 133 ntBASIC5.65□□□□□ -1.5
Smc1aQ9CU62 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Smc1aQ9CU62 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.65□□□□□ -1.51
Smc1aQ9CU62 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.65□□□□□ -1.51
Smc1aQ9CU62 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
Smc1aQ9CU62 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Smc1aQ9CU62 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Smc1aQ9CU62 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm24170-201ENSMUST00000104124 133 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm14619-201ENSMUST00000120480 168 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm13484-201ENSMUST00000120738 412 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm43408-201ENSMUST00000198263 440 ntBASIC5.64□□□□□ -1.51
Smc1aQ9CU62 Gm18011-201ENSMUST00000203717 565 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms