Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm25419-201ENSMUST00000104215 191 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm14836-201ENSMUST00000118567 471 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm14655-201ENSMUST00000120124 578 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm7670-201ENSMUST00000121272 641 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm13430-201ENSMUST00000121366 288 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm23669-201ENSMUST00000157470 128 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm26347-201ENSMUST00000157526 131 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm2959-201ENSMUST00000169844 621 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm21756-201ENSMUST00000178380 930 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm10784-201ENSMUST00000178715 238 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm21405-201ENSMUST00000179024 930 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28943-201ENSMUST00000186187 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28736-201ENSMUST00000186257 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm21191-201ENSMUST00000186484 930 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29401-201ENSMUST00000186690 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29178-204ENSMUST00000186784 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28589-201ENSMUST00000186991 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28936-201ENSMUST00000187153 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29121-201ENSMUST00000187611 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28243-201ENSMUST00000187801 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29159-201ENSMUST00000187969 379 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28844-202ENSMUST00000187977 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29058-201ENSMUST00000189510 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29624-201ENSMUST00000190018 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28780-201ENSMUST00000190223 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28188-201ENSMUST00000190483 236 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28467-201ENSMUST00000190981 318 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28969-211ENSMUST00000190992 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm29503-201ENSMUST00000191044 930 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm28990-207ENSMUST00000191219 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm36468-201ENSMUST00000192119 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm31572-201ENSMUST00000193341 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm30175-201ENSMUST00000194173 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm30858-201ENSMUST00000195516 615 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm43136-201ENSMUST00000200403 636 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm4587-201ENSMUST00000209135 637 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm33601-201ENSMUST00000210001 961 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Gm9202-201ENSMUST00000223036 437 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.33□□□□□ -1.72
Ebf4Q8K4J2 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm7680-201ENSMUST00000216198 1348 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm24230-201ENSMUST00000104313 129 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm13890-201ENSMUST00000117578 390 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm7206-201ENSMUST00000117730 508 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm15745-201ENSMUST00000119807 115 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm12936-201ENSMUST00000121439 301 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Gm21990-201ENSMUST00000124692 383 ntBASIC4.32□□□□□ -1.72
Ebf4Q8K4J2 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms