Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm26300-201ENSMUST00000102282 94 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm12587-201ENSMUST00000120180 427 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm11805-201ENSMUST00000121238 600 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm25383-201ENSMUST00000157810 144 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm17086-201ENSMUST00000171346 484 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm26731-201ENSMUST00000180683 543 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm27864-201ENSMUST00000183704 190 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm27781-201ENSMUST00000185185 92 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm19214-201ENSMUST00000191956 1083 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm33952-201ENSMUST00000197795 408 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm43444-201ENSMUST00000198123 291 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm44665-201ENSMUST00000205381 251 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm18598-201ENSMUST00000207724 597 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm2099-201ENSMUST00000220979 412 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Mir449a-201ENSMUST00000083641 91 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.2□□□□□ -1.42
Vps53Q8CCB4 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm8569-201ENSMUST00000117630 647 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm22339-201ENSMUST00000157718 62 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm2966-201ENSMUST00000166052 481 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm17204-201ENSMUST00000167936 478 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm8993-201ENSMUST00000182182 983 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm28385-201ENSMUST00000185671 292 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm20915-201ENSMUST00000191575 663 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm20940-201ENSMUST00000197308 360 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm42428-201ENSMUST00000198677 302 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm3257-201ENSMUST00000207217 675 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm20368-201ENSMUST00000220716 301 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Gm43845-201ENSMUST00000202462 1820 ntBASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Vps53Q8CCB4 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms