Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm37243-201ENSMUST00000193407 595 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 AC121978.1-201ENSMUST00000228357 380 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm11698-201ENSMUST00000117948 455 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm12189-201ENSMUST00000119779 912 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm16463-201ENSMUST00000120527 721 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm24363-201ENSMUST00000158440 311 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm37023-201ENSMUST00000192895 2426 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm19186-201ENSMUST00000219922 333 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Gm34165-201ENSMUST00000222012 1174 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Col6a6Q8C6K9 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm45762-201ENSMUST00000212863 2619 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm11485-201ENSMUST00000120048 1175 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm24931-201ENSMUST00000158324 107 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm15740-201ENSMUST00000159703 1292 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm6802-202ENSMUST00000186566 126 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm18183-201ENSMUST00000191024 615 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm44038-201ENSMUST00000203952 889 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 AC187103.2-201ENSMUST00000223605 1617 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm9408-201ENSMUST00000197375 1505 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm14985-201ENSMUST00000118693 786 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Mir5710-201ENSMUST00000176884 69 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm29479-201ENSMUST00000190352 455 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm43144-201ENSMUST00000198256 485 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.28□□□□□ -1.72
Col6a6Q8C6K9 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.28□□□□□ -1.73
Col6a6Q8C6K9 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm44843-201ENSMUST00000208320 1396 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm24544-201ENSMUST00000103862 110 ntBASIC4.27□□□□□ -1.73
Col6a6Q8C6K9 Gm11510-201ENSMUST00000120278 347 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms