Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm18484-201ENSMUST00000204389 991 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm16475-202ENSMUST00000209033 528 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm45834-201ENSMUST00000212445 454 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm7850-201ENSMUST00000212909 712 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 AC131745.3-201ENSMUST00000223582 554 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC147044.1-201ENSMUST00000223850 552 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC125350.5-201ENSMUST00000226102 517 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC158395.1-201ENSMUST00000227206 452 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gm37334-201ENSMUST00000192325 2938 ntBASIC8.13□□□□□ -1.11
Trim35Q8C006 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim35Q8C006 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim35Q8C006 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm6274-201ENSMUST00000118173 797 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm15062-201ENSMUST00000120567 367 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm23642-201ENSMUST00000157858 258 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm25433-201ENSMUST00000158283 286 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm25015-201ENSMUST00000158400 128 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm16162-201ENSMUST00000162296 297 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm25690-201ENSMUST00000175439 77 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm26557-201ENSMUST00000180756 493 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm28957-201ENSMUST00000190174 373 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm45454-201ENSMUST00000211484 455 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm26132-201ENSMUST00000083166 148 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Dalir-201ENSMUST00000188773 2170 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm43374-201ENSMUST00000202498 2391 ntBASIC8.12□□□□□ -1.11
Trim35Q8C006 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim35Q8C006 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim35Q8C006 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 AC126439.1-201ENSMUST00000226772 2104 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Malat1-201ENSMUST00000172812 6983 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim35Q8C006 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm26051-201ENSMUST00000104642 93 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm8250-201ENSMUST00000117398 774 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm14753-201ENSMUST00000118503 246 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm6044-201ENSMUST00000121819 499 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm24784-201ENSMUST00000157640 62 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm24348-201ENSMUST00000158710 130 ntBASIC8.11□□□□□ -1.11
Trim35Q8C006 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim35Q8C006 Gm22646-201ENSMUST00000175130 115 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms