Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm14931-201ENSMUST00000111079 253 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm11561-201ENSMUST00000117429 417 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm14125-202ENSMUST00000120921 756 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm23773-201ENSMUST00000158985 296 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm26925-201ENSMUST00000182470 957 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm19280-201ENSMUST00000190191 205 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm28437-201ENSMUST00000190277 783 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm37866-201ENSMUST00000191950 696 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm42776-201ENSMUST00000198031 406 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm4859-201ENSMUST00000199625 787 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 AC125543.1-201ENSMUST00000222778 101 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ddx55Q6ZPL9 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Mir92b-201ENSMUST00000102300 83 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm25537-201ENSMUST00000103851 109 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Mup-ps14-201ENSMUST00000118437 532 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm13679-201ENSMUST00000118678 484 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm11877-201ENSMUST00000118921 852 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Mup-ps10-201ENSMUST00000119626 556 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm14463-201ENSMUST00000121117 498 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm25413-201ENSMUST00000158544 312 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm6872-201ENSMUST00000165001 700 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm23631-201ENSMUST00000175291 123 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm9541-201ENSMUST00000188409 502 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm7299-201ENSMUST00000194441 581 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm42720-201ENSMUST00000196813 300 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 AC174780.1-201ENSMUST00000199415 1107 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm45422-201ENSMUST00000211476 246 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm46103-201ENSMUST00000217614 341 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 AC192616.1-201ENSMUST00000221922 132 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 AC168059.2-201ENSMUST00000224473 333 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ddx55Q6ZPL9 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms