Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Mir466n-201ENSMUST00000104798 94 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm22714-201ENSMUST00000116894 78 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm12386-201ENSMUST00000117380 688 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm8250-201ENSMUST00000117398 774 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm12492-201ENSMUST00000117665 564 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm9078-201ENSMUST00000119126 617 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm7058-201ENSMUST00000119209 902 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm6744-201ENSMUST00000119303 543 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm11227-201ENSMUST00000119774 471 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm11533-201ENSMUST00000120287 477 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm22452-201ENSMUST00000122804 104 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24444-201ENSMUST00000157244 308 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24236-201ENSMUST00000157794 134 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm22841-201ENSMUST00000158443 62 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24734-201ENSMUST00000158860 262 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm8256-201ENSMUST00000169178 453 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm25598-201ENSMUST00000179031 107 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm27599-201ENSMUST00000183758 174 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm6717-201ENSMUST00000185549 838 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm21654-201ENSMUST00000188086 691 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm38185-201ENSMUST00000193195 694 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm23054-201ENSMUST00000082804 162 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24254-201ENSMUST00000083702 104 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24029-201ENSMUST00000083928 143 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm24522-201ENSMUST00000083964 108 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Scaf4Q6PFF0 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm23692-201ENSMUST00000101881 160 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm11821-201ENSMUST00000117335 979 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm14365-201ENSMUST00000117535 587 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm11322-201ENSMUST00000118095 435 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm11882-201ENSMUST00000121463 506 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm15885-201ENSMUST00000122114 388 ntBASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Scaf4Q6PFF0 Gm23279-201ENSMUST00000157912 97 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms