Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm11484-201ENSMUST00000119808 338 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm13232-201ENSMUST00000121816 632 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm23743-201ENSMUST00000157389 274 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm17149-201ENSMUST00000164712 375 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm23638-201ENSMUST00000175073 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm23158-201ENSMUST00000175076 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm22907-201ENSMUST00000175198 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm22625-201ENSMUST00000175382 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm22875-201ENSMUST00000175449 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm25197-201ENSMUST00000175516 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm20701-201ENSMUST00000176082 347 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm27857-201ENSMUST00000176930 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm26268-201ENSMUST00000177685 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm23681-201ENSMUST00000178821 126 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm28389-201ENSMUST00000190090 697 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm23099-201ENSMUST00000083454 139 ntBASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Nup98Q6PFD9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Gm23709-201ENSMUST00000104364 130 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Gm22819-201ENSMUST00000157445 303 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Gm22211-201ENSMUST00000158097 156 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Mir6391-201ENSMUST00000184391 104 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Gm9616-201ENSMUST00000221154 781 ntBASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
Nup98Q6PFD9 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm14575-201ENSMUST00000117210 560 ntBASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm22326-201ENSMUST00000158897 351 ntBASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nup98Q6PFD9 Gm14854-201ENSMUST00000117758 841 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm23171-201ENSMUST00000157159 264 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm29196-201ENSMUST00000189239 618 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm37088-201ENSMUST00000193887 406 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm4734-201ENSMUST00000200117 777 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm8911-201ENSMUST00000213986 652 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm5374-202ENSMUST00000222910 314 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nup98Q6PFD9 Gm22498-201ENSMUST00000104497 86 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms