Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr936-202ENSMUST00000216912 937 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC140930.4-201ENSMUST00000220750 150 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm33312-201ENSMUST00000222443 332 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC131747.1-201ENSMUST00000226159 793 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 AC117202.1-201ENSMUST00000227007 445 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm23614-201ENSMUST00000082598 107 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm24490-201ENSMUST00000083803 98 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.28□□□□□ -1.4
Sh3rf1Q69ZI1 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.4
Sh3rf1Q69ZI1 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Mir669g-201ENSMUST00000116809 123 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm13772-201ENSMUST00000118431 317 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14506-201ENSMUST00000121165 536 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11848-201ENSMUST00000121207 973 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm22733-201ENSMUST00000158094 91 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18522-201ENSMUST00000173947 650 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm20620-201ENSMUST00000177528 168 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28474-201ENSMUST00000188501 315 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28191-201ENSMUST00000189112 211 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm28788-201ENSMUST00000189717 375 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm29558-201ENSMUST00000190134 375 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37313-201ENSMUST00000191673 290 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm18867-201ENSMUST00000198022 1179 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm44465-201ENSMUST00000199536 114 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm45448-201ENSMUST00000211739 209 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm2829-201ENSMUST00000213121 499 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm7780-201ENSMUST00000214787 406 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 CT025680.1-201ENSMUST00000217375 375 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 AC124569.1-201ENSMUST00000225932 101 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm25133-201ENSMUST00000082647 130 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm24695-201ENSMUST00000083877 83 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Sh3rf1Q69ZI1 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Sh3rf1Q69ZI1 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms