Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.39□□□□□ -1.55
Foxc1Q61572 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Foxc1Q61572 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Foxc1Q61572 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Foxc1Q61572 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Foxc1Q61572 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.39□□□□□ -1.55
Foxc1Q61572 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Foxc1Q61572 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Foxc1Q61572 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC5.39□□□□□ -1.55
Foxc1Q61572 Gm42973-201ENSMUST00000197913 3200 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm24889-201ENSMUST00000104388 132 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Mir669e-201ENSMUST00000117003 119 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm12844-201ENSMUST00000119463 582 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm12593-201ENSMUST00000120981 743 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm7651-201ENSMUST00000173398 901 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm23639-201ENSMUST00000175078 132 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm17048-201ENSMUST00000179266 847 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm28781-201ENSMUST00000185760 696 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29307-201ENSMUST00000187367 696 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29355-201ENSMUST00000188178 697 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm28953-201ENSMUST00000188336 697 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29339-201ENSMUST00000189613 696 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29239-201ENSMUST00000190304 696 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29407-201ENSMUST00000191468 696 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Trav15n-3-201ENSMUST00000200498 168 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm18482-201ENSMUST00000202405 760 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm44475-201ENSMUST00000204041 424 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm18791-201ENSMUST00000204611 726 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm18850-201ENSMUST00000211578 388 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC5.38□□□□□ -1.55
Foxc1Q61572 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm46327-201ENSMUST00000218240 365 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 AV026068-237ENSMUST00000226075 572 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 AC151833.1-201ENSMUST00000227752 574 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm23451-201ENSMUST00000083328 122 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Mir484-201ENSMUST00000093566 67 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Foxc1Q61572 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.38□□□□□ -1.55
Foxc1Q61572 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.38□□□□□ -1.55
Foxc1Q61572 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms