Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm43178-201ENSMUST00000197257 1386 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Ear-ps2-201ENSMUST00000100689 466 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm11486-201ENSMUST00000107322 478 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm7206-201ENSMUST00000117730 508 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm16200-201ENSMUST00000120385 331 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm8761-201ENSMUST00000121507 955 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm14122-201ENSMUST00000122076 973 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm26401-201ENSMUST00000158502 76 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm20530-201ENSMUST00000174261 254 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm27688-201ENSMUST00000183634 91 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Mir6398-201ENSMUST00000184541 102 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm38231-201ENSMUST00000192030 347 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.83□□□□□ -1.64
Sox17Q61473 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm42509-201ENSMUST00000197390 781 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm42428-201ENSMUST00000198677 302 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm7733-201ENSMUST00000199038 919 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm18011-201ENSMUST00000203717 565 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Gm44239-201ENSMUST00000204228 271 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Sox17Q61473 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 CT033778.1-201ENSMUST00000224767 767 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 AC154806.3-201ENSMUST00000227376 439 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 AC125464.1-201ENSMUST00000228013 512 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 AC154618.2-201ENSMUST00000228299 452 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm6863-201ENSMUST00000052882 636 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Sox17Q61473 Gm24207-201ENSMUST00000082781 108 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Mir375-201ENSMUST00000083682 64 ntBASIC4.83□□□□□ -1.64
Sox17Q61473 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sox17Q61473 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sox17Q61473 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sox17Q61473 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Sox17Q61473 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sox17Q61473 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Sox17Q61473 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Sox17Q61473 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm22372-201ENSMUST00000104589 136 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm10241-201ENSMUST00000117664 286 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Gm11212-201ENSMUST00000118337 618 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm24944-201ENSMUST00000158330 128 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Gm6632-201ENSMUST00000168425 954 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Gm22693-201ENSMUST00000175049 442 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm8498-201ENSMUST00000188227 974 ntBASIC4.82□□□□□ -1.64
Sox17Q61473 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC4.82□□□□□ -1.64
Sox17Q61473 Gm28640-201ENSMUST00000190918 550 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms