Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Snord70-201ENSMUST00000104157 87 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm14365-201ENSMUST00000117535 587 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm8501-201ENSMUST00000117684 432 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm12102-201ENSMUST00000118251 604 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm14293-201ENSMUST00000118528 577 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm13991-201ENSMUST00000120190 648 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm12308-201ENSMUST00000120440 389 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm8545-201ENSMUST00000120692 801 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm15111-201ENSMUST00000122142 878 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Mir1903-201ENSMUST00000122574 80 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm23981-201ENSMUST00000157136 106 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm24444-201ENSMUST00000157244 308 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm26372-201ENSMUST00000157831 236 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Mir3110-201ENSMUST00000175053 80 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.03□□□□□ -1.44
Ebf1Q07802 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm37869-201ENSMUST00000193385 595 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm37399-201ENSMUST00000195224 416 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Ighv1-68-201ENSMUST00000198789 294 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Mir219c-201ENSMUST00000199860 60 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm2622-201ENSMUST00000200018 471 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm45228-201ENSMUST00000206585 352 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm19900-201ENSMUST00000207285 576 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
Ebf1Q07802 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm23628-201ENSMUST00000082464 173 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Ebf1Q07802 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm4954-201ENSMUST00000135069 1601 ntBASIC6.03□□□□□ -1.44
Ebf1Q07802 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ebf1Q07802 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Ebf1Q07802 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Ebf1Q07802 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.02□□□□□ -1.44
Ebf1Q07802 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.02□□□□□ -1.44
Ebf1Q07802 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm15108-201ENSMUST00000116160 803 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm11876-201ENSMUST00000120002 269 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm12494-201ENSMUST00000121684 521 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm7973-201ENSMUST00000122107 488 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm15885-201ENSMUST00000122114 388 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Ebf1Q07802 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm23280-201ENSMUST00000157905 139 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm23224-201ENSMUST00000158122 271 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm24767-201ENSMUST00000158509 95 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm7316-201ENSMUST00000165395 445 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Ebf1Q07802 Gm19203-201ENSMUST00000174049 939 ntBASIC6.02□□□□□ -1.45
Ebf1Q07802 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms