Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col17a1Q07563 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Mir6905-201ENSMUST00000184228 70 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Mir6993-201ENSMUST00000184912 65 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm28471-201ENSMUST00000185994 615 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm20915-201ENSMUST00000191575 663 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm37490-201ENSMUST00000195566 724 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 AC123067.1-201ENSMUST00000217711 462 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 AC153852.1-201ENSMUST00000217881 567 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC7.89□□□□□ -1.15
Col17a1Q07563 AC159885.1-201ENSMUST00000222221 199 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm6104-201ENSMUST00000078030 603 ntBASIC7.89□□□□□ -1.15
Col17a1Q07563 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Col17a1Q07563 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Col17a1Q07563 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm12931-201ENSMUST00000117046 324 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Mir5134-201ENSMUST00000175529 78 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm23816-201ENSMUST00000179617 132 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm26915-201ENSMUST00000183080 748 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm7946-201ENSMUST00000203326 958 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm45636-201ENSMUST00000210497 1064 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 AC154623.1-201ENSMUST00000224348 805 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 AC125405.1-201ENSMUST00000226406 589 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 AC161269.1-201ENSMUST00000228426 318 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 AC187103.2-201ENSMUST00000223605 1617 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 CT025604.1-201ENSMUST00000221111 3436 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm43178-201ENSMUST00000197257 1386 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm2099-202ENSMUST00000223310 3341 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm37011-201ENSMUST00000195543 2935 ntBASIC7.88□□□□□ -1.15
Col17a1Q07563 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col17a1Q07563 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Col17a1Q07563 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC7.88□□□□□ -1.15
Col17a1Q07563 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm19113-201ENSMUST00000217552 1828 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm11598-201ENSMUST00000119257 357 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Gm13593-201ENSMUST00000121329 692 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.87□□□□□ -1.15
Col17a1Q07563 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms