Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm23824-201ENSMUST00000158741 276 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Mir7033-201ENSMUST00000184259 81 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Mir8105-201ENSMUST00000184718 89 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Gm29605-201ENSMUST00000190800 292 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm29490-201ENSMUST00000190923 342 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm37193-201ENSMUST00000193087 513 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm7626-201ENSMUST00000195801 353 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm43048-201ENSMUST00000196101 388 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm43856-201ENSMUST00000197004 369 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm42924-201ENSMUST00000197261 185 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.87□□□□□ -1.47
Msx2Q03358 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.87□□□□□ -1.47
Msx2Q03358 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC5.87□□□□□ -1.47
Msx2Q03358 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Gm2754-201ENSMUST00000223383 589 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.87□□□□□ -1.47
Msx2Q03358 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Gm7204-201ENSMUST00000062591 600 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Msx2Q03358 Gm25512-201ENSMUST00000083863 107 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.87□□□□□ -1.47
Msx2Q03358 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Msx2Q03358 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Msx2Q03358 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Msx2Q03358 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Msx2Q03358 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Msx2Q03358 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm24273-201ENSMUST00000102332 164 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm12077-201ENSMUST00000117049 364 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm9429-201ENSMUST00000117804 868 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm14580-201ENSMUST00000119122 718 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm15452-201ENSMUST00000119877 240 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm12778-201ENSMUST00000122341 333 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm10157-201ENSMUST00000139408 343 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm22214-201ENSMUST00000157563 172 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm22158-201ENSMUST00000158411 126 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm17142-201ENSMUST00000164933 645 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm18604-201ENSMUST00000172535 558 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm23162-201ENSMUST00000175081 121 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm26959-201ENSMUST00000182376 978 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm28114-201ENSMUST00000187232 379 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm29111-201ENSMUST00000188823 696 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Msx2Q03358 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm28584-201ENSMUST00000191489 696 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm38138-201ENSMUST00000193274 696 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm2142-201ENSMUST00000197899 589 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm18559-201ENSMUST00000208249 604 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Gm45628-201ENSMUST00000210849 274 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm8106-201ENSMUST00000213123 523 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.86□□□□□ -1.47
Msx2Q03358 Gm18113-201ENSMUST00000220630 303 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC131117.2-202ENSMUST00000224539 547 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.86□□□□□ -1.47
Msx2Q03358 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms