Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm23964-201ENSMUST00000157966 107 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm23046-201ENSMUST00000158369 284 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm27875-201ENSMUST00000184425 123 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Mir6926-201ENSMUST00000184562 68 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm21803-201ENSMUST00000188897 693 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm37030-201ENSMUST00000194254 295 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm42581-201ENSMUST00000201774 966 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm20997-201ENSMUST00000205148 231 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm5045-201ENSMUST00000027054 810 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm26330-201ENSMUST00000082817 104 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm12520-201ENSMUST00000117493 316 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm15168-201ENSMUST00000121057 316 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm7840-201ENSMUST00000122086 533 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm22277-201ENSMUST00000157204 277 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm25605-201ENSMUST00000158364 124 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm16589-201ENSMUST00000159522 918 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm27528-201ENSMUST00000183544 205 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm29086-201ENSMUST00000186774 222 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm29085-201ENSMUST00000187108 225 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm38046-201ENSMUST00000192733 550 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm10292-202ENSMUST00000193165 585 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm43136-201ENSMUST00000200403 636 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm42643-201ENSMUST00000200504 279 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm8719-201ENSMUST00000203602 534 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.29□□□□□ -1.72
Nkx3-1P97436 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx3-1P97436 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Gm37357-201ENSMUST00000192386 3123 ntBASIC4.28□□□□□ -1.72
Nkx3-1P97436 Gm43164-201ENSMUST00000202529 2128 ntBASIC4.28□□□□□ -1.72
Nkx3-1P97436 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Gm37226-201ENSMUST00000191644 3255 ntBASIC4.28□□□□□ -1.72
Nkx3-1P97436 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.28□□□□□ -1.72
Nkx3-1P97436 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nkx3-1P97436 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms