Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm37053-201ENSMUST00000192399 2087 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 AC159002.2-201ENSMUST00000228843 4874 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.22□□□□□ -1.89
PrkdcP97313 AC131720.3-201ENSMUST00000219113 275 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Mir338-201ENSMUST00000083666 98 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
PrkdcP97313 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Gm43312-201ENSMUST00000201655 2466 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 AC130661.1-201ENSMUST00000218248 1680 ntBASIC3.22□□□□□ -1.89
PrkdcP97313 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PrkdcP97313 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PrkdcP97313 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PrkdcP97313 Gm23709-201ENSMUST00000104364 130 ntBASIC3.21□□□□□ -1.89
PrkdcP97313 Gm22453-201ENSMUST00000122801 318 ntBASIC3.21□□□□□ -1.89
PrkdcP97313 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC3.21□□□□□ -1.89
PrkdcP97313 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.21□□□□□ -1.89
PrkdcP97313 AC119241.1-201ENSMUST00000223651 534 ntBASIC3.21□□□□□ -1.89
PrkdcP97313 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PrkdcP97313 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC3.21□□□□□ -1.89
PrkdcP97313 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PrkdcP97313 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
PrkdcP97313 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.21□□□□□ -1.89
PrkdcP97313 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm14706-201ENSMUST00000117744 255 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm24503-201ENSMUST00000158454 135 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
PrkdcP97313 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC3.21□□□□□ -1.9
PrkdcP97313 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm43011-201ENSMUST00000197897 4433 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm37248-201ENSMUST00000193576 3174 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm11409-201ENSMUST00000118621 403 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm24224-201ENSMUST00000158828 258 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm45458-201ENSMUST00000209900 522 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm34779-201ENSMUST00000210036 263 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PrkdcP97313 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
PrkdcP97313 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm44751-201ENSMUST00000208302 4387 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm14916-201ENSMUST00000121904 204 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PrkdcP97313 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Gm4557-201ENSMUST00000185826 907 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 Gm8708-201ENSMUST00000188500 906 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC3.21□□□□□ -1.9
PrkdcP97313 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.21□□□□□ -1.9
PrkdcP97313 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms