Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm15164-201ENSMUST00000122203 271 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm26023-201ENSMUST00000122722 313 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm22534-201ENSMUST00000158173 104 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm23968-201ENSMUST00000175047 125 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm25284-201ENSMUST00000180345 141 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Mir6238-201ENSMUST00000184140 129 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Mir6337-201ENSMUST00000184194 105 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm28141-201ENSMUST00000186676 342 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm28974-201ENSMUST00000187893 231 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm37380-201ENSMUST00000193752 397 ntBASIC5.79□□□□□ -1.48
SgcbP82349 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.79□□□□□ -1.48
SgcbP82349 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm3148-201ENSMUST00000203594 612 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm45171-201ENSMUST00000206360 736 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm19219-201ENSMUST00000215863 724 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm5023-201ENSMUST00000217442 587 ntBASIC5.79□□□□□ -1.48
SgcbP82349 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.79□□□□□ -1.48
SgcbP82349 AC154861.1-201ENSMUST00000223767 800 ntBASIC5.79□□□□□ -1.48
SgcbP82349 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.79□□□□□ -1.48
SgcbP82349 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SgcbP82349 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm21731-201ENSMUST00000079524 489 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SgcbP82349 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Gm10205-201ENSMUST00000087431 234 ntBASIC5.79□□□□□ -1.48
SgcbP82349 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SgcbP82349 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SgcbP82349 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SgcbP82349 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm24265-201ENSMUST00000101833 141 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm25213-201ENSMUST00000102388 113 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Mir669g-201ENSMUST00000116809 123 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm14711-201ENSMUST00000117056 217 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm15901-201ENSMUST00000117663 941 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm11908-201ENSMUST00000117755 347 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Gm11920-201ENSMUST00000118491 563 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC5.78□□□□□ -1.48
SgcbP82349 Gm5405-201ENSMUST00000120478 609 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm14605-201ENSMUST00000120599 268 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm11498-201ENSMUST00000120660 949 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Gm12369-201ENSMUST00000121343 942 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Mir1900-201ENSMUST00000122714 78 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SgcbP82349 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.78□□□□□ -1.48
SgcbP82349 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Mir1953-201ENSMUST00000157866 89 ntBASIC5.78□□□□□ -1.48
SgcbP82349 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SgcbP82349 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SgcbP82349 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms