Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm28337-201ENSMUST00000190425 666 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm28504-201ENSMUST00000190977 666 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm38030-201ENSMUST00000192376 475 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm31511-201ENSMUST00000193134 657 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm35843-201ENSMUST00000193716 666 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm33973-201ENSMUST00000195148 534 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 AC122844.1-201ENSMUST00000195971 107 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm43224-201ENSMUST00000201567 898 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr1309-201ENSMUST00000207885 964 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm18851-201ENSMUST00000210087 1058 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 AC154552.4-201ENSMUST00000222171 151 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Rfx1P48377 n-R5s65-201ENSMUST00000082614 117 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Gm23097-201ENSMUST00000083448 105 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm44660-201ENSMUST00000207134 2465 ntBASIC7.13□□□□□ -1.27
Rfx1P48377 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Rfx1P48377 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Rfx1P48377 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 AC164297.6-201ENSMUST00000224643 1568 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm14847-201ENSMUST00000121978 519 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm9593-201ENSMUST00000166034 469 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm6113-201ENSMUST00000180319 639 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm27036-201ENSMUST00000182465 980 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm8151-201ENSMUST00000184817 871 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm8823-201ENSMUST00000193158 433 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm37784-201ENSMUST00000193233 189 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ighv1-29-201ENSMUST00000194116 342 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm7019-201ENSMUST00000194122 369 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm37341-201ENSMUST00000194680 371 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm5886-202ENSMUST00000203957 522 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 AC127279.1-201ENSMUST00000220140 637 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 AC116589.1-201ENSMUST00000220634 327 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 AC167977.1-201ENSMUST00000221384 234 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Rfx1P48377 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC7.12□□□□□ -1.27
Rfx1P48377 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Rfx1P48377 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Rfx1P48377 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms