Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24402-201ENSMUST00000157873 91 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm23513-201ENSMUST00000158181 133 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Gm27044-201ENSMUST00000183033 796 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm37241-201ENSMUST00000191736 523 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm43015-201ENSMUST00000199087 565 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm2622-201ENSMUST00000200018 471 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.94□□□□□ -1.46
Traf1P39428 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.94□□□□□ -1.46
Traf1P39428 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.94□□□□□ -1.46
Traf1P39428 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Traf1P39428 Gm23626-201ENSMUST00000082458 133 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Snord15b-201ENSMUST00000083032 145 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Traf1P39428 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Traf1P39428 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Traf1P39428 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.94□□□□□ -1.46
Traf1P39428 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Traf1P39428 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Traf1P39428 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Traf1P39428 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.94□□□□□ -1.46
Traf1P39428 Smc5-206ENSMUST00000226111 3265 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Traf1P39428 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm14125-202ENSMUST00000120921 756 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm23467-201ENSMUST00000157127 159 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm23354-201ENSMUST00000158426 104 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC5.93□□□□□ -1.46
Traf1P39428 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm22917-201ENSMUST00000180116 110 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Mir7056-201ENSMUST00000183776 59 ntBASIC5.93□□□□□ -1.46
Traf1P39428 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm42990-201ENSMUST00000199231 312 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm43631-201ENSMUST00000202011 369 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm3912-203ENSMUST00000211024 367 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Gm19885-201ENSMUST00000212853 343 ntBASIC5.93□□□□□ -1.46
Traf1P39428 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm25260-201ENSMUST00000083053 134 ntBASIC5.93□□□□□ -1.46
Traf1P39428 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Traf1P39428 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.93□□□□□ -1.46
Traf1P39428 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Traf1P39428 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Traf1P39428 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Traf1P39428 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm5383-201ENSMUST00000121177 617 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm11759-201ENSMUST00000121742 464 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.92□□□□□ -1.46
Traf1P39428 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Traf1P39428 Gm23534-201ENSMUST00000157539 97 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm25861-201ENSMUST00000158251 109 ntBASIC5.92□□□□□ -1.46
Traf1P39428 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm5285-201ENSMUST00000193089 666 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm42814-201ENSMUST00000199370 460 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.92□□□□□ -1.46
Traf1P39428 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.92□□□□□ -1.46
Traf1P39428 Gm21112-201ENSMUST00000212224 578 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm7760-201ENSMUST00000212265 578 ntBASIC5.92□□□□□ -1.46
Traf1P39428 Gm7807-201ENSMUST00000212475 578 ntBASIC5.92□□□□□ -1.46
Traf1P39428 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.92□□□□□ -1.46
Traf1P39428 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms