Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm14656-201ENSMUST00000120342 502 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm24393-201ENSMUST00000158135 97 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm4842-201ENSMUST00000183237 835 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm37167-201ENSMUST00000194946 396 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm18193-201ENSMUST00000210017 772 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 AC164116.1-201ENSMUST00000225810 622 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 AC168881.1-201ENSMUST00000226018 430 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Col18a1P39061 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm15075-201ENSMUST00000122187 477 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm22211-201ENSMUST00000158097 156 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm8941-201ENSMUST00000181451 899 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Mir6412-201ENSMUST00000184477 97 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC7.03□□□□□ -1.28
Col18a1P39061 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm37979-201ENSMUST00000193065 712 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm8189-203ENSMUST00000211159 1225 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 AC145736.1-201ENSMUST00000214661 479 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm5176-201ENSMUST00000218244 1227 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC7.03□□□□□ -1.28
Col18a1P39061 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC7.03□□□□□ -1.28
Col18a1P39061 AC154239.1-201ENSMUST00000228565 406 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col18a1P39061 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col18a1P39061 Gm24268-201ENSMUST00000082990 110 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 n-R5s170-201ENSMUST00000083726 113 ntBASIC7.03□□□□□ -1.28
Col18a1P39061 Gm29488-201ENSMUST00000191427 2402 ntBASIC7.02□□□□□ -1.28
Col18a1P39061 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
Col18a1P39061 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.02□□□□□ -1.28
Col18a1P39061 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm23594-201ENSMUST00000104307 134 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm12423-201ENSMUST00000118334 135 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm14753-201ENSMUST00000118503 246 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm13367-201ENSMUST00000119955 796 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 n-R5s98-201ENSMUST00000122549 119 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm25332-201ENSMUST00000158038 105 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm20832-201ENSMUST00000189076 665 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm38330-201ENSMUST00000192743 959 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm30638-201ENSMUST00000195570 656 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm36728-201ENSMUST00000195782 665 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm19987-201ENSMUST00000216339 499 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 AC139376.1-201ENSMUST00000220056 1250 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 AC124732.4-201ENSMUST00000220930 1274 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 AC154623.1-201ENSMUST00000224348 805 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr116-201ENSMUST00000072265 966 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col18a1P39061 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col18a1P39061 Mir199a-2-201ENSMUST00000093618 110 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Gm14324-201ENSMUST00000121358 3051 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Gm43164-201ENSMUST00000202529 2128 ntBASIC7.02□□□□□ -1.29
Col18a1P39061 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col18a1P39061 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC7.01□□□□□ -1.29
Col18a1P39061 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col18a1P39061 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms