Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm16298-201ENSMUST00000161107 420 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm16297-201ENSMUST00000161466 459 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm22932-201ENSMUST00000175510 72 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm16531-201ENSMUST00000180658 967 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm27864-201ENSMUST00000183704 190 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm27985-201ENSMUST00000185112 378 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm28934-201ENSMUST00000186491 346 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm29519-201ENSMUST00000186994 398 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm28877-201ENSMUST00000191349 604 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm37293-201ENSMUST00000191658 295 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm18426-201ENSMUST00000191874 973 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm37272-201ENSMUST00000193401 488 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm7733-201ENSMUST00000199038 919 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm8999-201ENSMUST00000204951 969 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm44768-201ENSMUST00000205719 393 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm46138-201ENSMUST00000215294 426 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 AC155808.1-201ENSMUST00000219288 409 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC3.98□□□□□ -1.77
Sdc1P18828 AC124510.2-201ENSMUST00000221958 683 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 AC159256.1-201ENSMUST00000224298 1039 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 AC157572.4-201ENSMUST00000228203 549 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Sdc1P18828 Mir215-201ENSMUST00000083628 112 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Sdc1P18828 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.98□□□□□ -1.77
Sdc1P18828 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC3.98□□□□□ -1.77
Sdc1P18828 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Sdc1P18828 Gm7680-201ENSMUST00000216198 1348 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Sdc1P18828 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm37412-201ENSMUST00000194866 4321 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm17791-201ENSMUST00000185660 1501 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Sdc1P18828 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm13428-201ENSMUST00000117540 365 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm14107-201ENSMUST00000117774 330 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm7494-201ENSMUST00000121248 441 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm11385-201ENSMUST00000121513 570 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm13508-201ENSMUST00000121639 775 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm22514-201ENSMUST00000122547 308 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC3.97□□□□□ -1.77
Sdc1P18828 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm23995-201ENSMUST00000158060 129 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm25432-201ENSMUST00000158284 66 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm24931-201ENSMUST00000158324 107 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Sdc1P18828 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm5258-201ENSMUST00000165437 327 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Sdc1P18828 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm27348-201ENSMUST00000184511 170 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm2914-201ENSMUST00000186120 328 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm37475-201ENSMUST00000193107 1015 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm5842-201ENSMUST00000195073 622 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 AC117240.1-201ENSMUST00000199436 61 ntBASIC3.97□□□□□ -1.77
Sdc1P18828 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.97□□□□□ -1.77
Sdc1P18828 Gm44162-201ENSMUST00000203543 544 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms