Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Cdx1P18111 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Cdx1P18111 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm15012-201ENSMUST00000119176 106 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm13473-201ENSMUST00000119289 367 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm12332-201ENSMUST00000121397 922 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.2□□□□□ -1.74
Cdx1P18111 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm6969-201ENSMUST00000140065 342 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm22378-201ENSMUST00000157481 111 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm22588-201ENSMUST00000157510 140 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm22519-201ENSMUST00000158270 178 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Mir6903-201ENSMUST00000183597 88 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm37336-202ENSMUST00000193705 468 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm2429-201ENSMUST00000194635 586 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm38334-201ENSMUST00000195060 313 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm38384-201ENSMUST00000195413 1122 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm4714-201ENSMUST00000203395 279 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm44214-201ENSMUST00000204153 606 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm9278-201ENSMUST00000205508 553 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm5735-201ENSMUST00000207053 167 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC4.2□□□□□ -1.74
Cdx1P18111 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm18899-201ENSMUST00000217663 546 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 AC124445.1-201ENSMUST00000218613 452 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm7768-201ENSMUST00000222988 597 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm7042-201ENSMUST00000223027 384 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 AC123665.4-201ENSMUST00000228790 249 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Cdx1P18111 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 n-R5s215-201ENSMUST00000082480 104 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Gm22423-201ENSMUST00000082861 184 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm4759-201ENSMUST00000183414 6622 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
Cdx1P18111 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Cdx1P18111 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.2□□□□□ -1.74
Cdx1P18111 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Cdx1P18111 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Cdx1P18111 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm14836-201ENSMUST00000118567 471 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm12387-201ENSMUST00000118573 955 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm11975-201ENSMUST00000118772 481 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm24628-201ENSMUST00000122761 289 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm6047-201ENSMUST00000167221 574 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm18343-201ENSMUST00000172802 604 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Gm4617-201ENSMUST00000178993 331 ntBASIC4.19□□□□□ -1.74
Cdx1P18111 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Cdx1P18111 Gm8604-201ENSMUST00000183150 965 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms