Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11743-201ENSMUST00000117385 1735 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.9□□□□□ -1.79
Hmgb3O54879 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm22592-201ENSMUST00000104242 131 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 n-R5s172-201ENSMUST00000104508 114 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm22374-201ENSMUST00000104583 132 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm16149-201ENSMUST00000117631 309 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm15803-201ENSMUST00000120118 394 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm11448-201ENSMUST00000120427 450 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm2182-201ENSMUST00000145243 663 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm11962-201ENSMUST00000145746 255 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm22518-201ENSMUST00000158267 68 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm27036-201ENSMUST00000182465 980 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28683-201ENSMUST00000187134 615 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28840-205ENSMUST00000189320 615 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28835-203ENSMUST00000190062 615 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 AL645522.1-201ENSMUST00000197692 104 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm2040-201ENSMUST00000202979 289 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm45200-201ENSMUST00000207434 919 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm44892-201ENSMUST00000208595 488 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 AC161269.1-201ENSMUST00000228426 318 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm24166-201ENSMUST00000082724 135 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm42559-201ENSMUST00000201811 3532 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm2123-201ENSMUST00000221476 2836 ntBASIC3.89□□□□□ -1.79
Hmgb3O54879 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb3O54879 AC123705.2-201ENSMUST00000221653 2009 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm7709-201ENSMUST00000199391 1858 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb3O54879 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm6134-201ENSMUST00000117265 171 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm13772-201ENSMUST00000118431 317 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm11409-201ENSMUST00000118621 403 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm12849-201ENSMUST00000120013 739 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm14712-201ENSMUST00000120195 772 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb3O54879 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm22968-201ENSMUST00000157955 118 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm6650-201ENSMUST00000166710 614 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm37882-201ENSMUST00000195254 196 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm42539-201ENSMUST00000197009 308 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm44038-201ENSMUST00000203952 889 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm8039-201ENSMUST00000204758 712 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm19169-201ENSMUST00000220109 1246 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgb3O54879 CT954323.2-201ENSMUST00000222056 213 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 AC165953.1-201ENSMUST00000226386 357 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb3O54879 n-R5s170-201ENSMUST00000083726 113 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm6177-201ENSMUST00000085589 465 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Gm15170-201ENSMUST00000121593 2023 ntBASIC3.88□□□□□ -1.79
Hmgb3O54879 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
Hmgb3O54879 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms