Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm2614-201ENSMUST00000223227 403 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm23242-201ENSMUST00000083055 107 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.48□□□□□ -1.53
Pcdh1F7BJK1 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 CT009757.4-201ENSMUST00000221520 2541 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm14982-201ENSMUST00000121102 442 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm16428-201ENSMUST00000121193 723 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm12929-201ENSMUST00000122406 370 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm25281-201ENSMUST00000157270 104 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm26349-201ENSMUST00000157530 130 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm23032-201ENSMUST00000157995 107 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm22548-201ENSMUST00000174899 78 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm21839-201ENSMUST00000179536 378 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm21729-201ENSMUST00000180058 664 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm21853-201ENSMUST00000180071 664 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm6717-201ENSMUST00000185549 838 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29495-201ENSMUST00000189319 664 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Ighv8-3-201ENSMUST00000194985 295 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm36953-201ENSMUST00000195295 268 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm37358-201ENSMUST00000195492 479 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm43148-201ENSMUST00000198237 520 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm43472-201ENSMUST00000200175 154 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm43505-201ENSMUST00000200579 139 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC134334.1-201ENSMUST00000214277 255 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm11360-201ENSMUST00000221898 262 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 CT030238.4-201ENSMUST00000228579 801 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.47□□□□□ -1.53
Pcdh1F7BJK1 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Pcdh1F7BJK1 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Pcdh1F7BJK1 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms