Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm14706-201ENSMUST00000117744 255 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm9432-201ENSMUST00000117810 759 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm8724-201ENSMUST00000081668 483 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Mir5106-201ENSMUST00000174936 73 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm45420-201ENSMUST00000211243 425 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.66□□□□□ -1.66
Col6a3E9PWQ3 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 AC121997.2-201ENSMUST00000228095 2294 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 AC131667.1-201ENSMUST00000214665 2175 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm14916-201ENSMUST00000121904 204 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Mir7009-201ENSMUST00000184519 64 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm43853-201ENSMUST00000197162 301 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 CT009480.2-201ENSMUST00000225152 3369 ntBASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a3E9PWQ3 Gm37086-201ENSMUST00000193082 3452 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Gm5244-202ENSMUST00000189517 743 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Mir6516-201ENSMUST00000196236 110 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Gm45458-201ENSMUST00000209900 522 ntBASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a3E9PWQ3 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm24281-201ENSMUST00000104234 136 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm11679-201ENSMUST00000121830 779 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm15885-201ENSMUST00000122114 388 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm23112-201ENSMUST00000158606 125 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm5258-201ENSMUST00000165437 327 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm45860-201ENSMUST00000212700 334 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm14619-201ENSMUST00000120480 168 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm11200-201ENSMUST00000121698 448 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm9775-201ENSMUST00000189402 331 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr936-202ENSMUST00000216912 937 ntBASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a3E9PWQ3 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms