Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Clip3B9EHT4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.73□□□□□ -1.49
Clip3B9EHT4 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Mir700-201ENSMUST00000102169 79 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm23987-201ENSMUST00000117039 129 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm12598-201ENSMUST00000117333 830 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm14529-201ENSMUST00000117894 406 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm7700-201ENSMUST00000120273 970 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm16412-201ENSMUST00000121602 273 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm12094-201ENSMUST00000121781 472 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm25979-201ENSMUST00000157177 138 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm10177-202ENSMUST00000161698 207 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm19560-201ENSMUST00000177510 514 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm27960-201ENSMUST00000183445 184 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Mir6411-201ENSMUST00000183556 108 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm29551-201ENSMUST00000190913 698 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm33973-201ENSMUST00000195148 534 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm9632-201ENSMUST00000195934 643 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC124542.1-201ENSMUST00000205588 908 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm7128-201ENSMUST00000211639 533 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm45722-201ENSMUST00000213075 466 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC154738.4-201ENSMUST00000228310 414 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.72□□□□□ -1.49
Clip3B9EHT4 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Clip3B9EHT4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Clip3B9EHT4 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.71□□□□□ -1.49
Clip3B9EHT4 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Clip3B9EHT4 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.71□□□□□ -1.49
Clip3B9EHT4 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm14050-201ENSMUST00000117052 346 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm6893-201ENSMUST00000118385 522 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm14805-201ENSMUST00000120172 340 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm11848-201ENSMUST00000121207 973 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm25962-201ENSMUST00000157173 168 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm24719-201ENSMUST00000157520 110 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm23553-201ENSMUST00000157817 295 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm23385-201ENSMUST00000158592 295 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm6650-201ENSMUST00000166710 614 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm9671-201ENSMUST00000171502 547 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Clip3B9EHT4 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.71□□□□□ -1.5
Clip3B9EHT4 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms