Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14933-201ENSMUST00000118840 481 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm11631-201ENSMUST00000119220 156 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm13932-201ENSMUST00000120873 610 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm14303-201ENSMUST00000121320 171 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm24444-201ENSMUST00000157244 308 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm8861-201ENSMUST00000196346 832 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm18482-201ENSMUST00000202405 760 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm19201-201ENSMUST00000210127 778 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Nsa2-203ENSMUST00000225410 974 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Mir27a-201ENSMUST00000083510 87 ntBASIC5.33□□□□□ -1.56
Scn3aA2ASI5 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm16082-201ENSMUST00000115992 377 ntBASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm43144-201ENSMUST00000198256 485 ntBASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm29781-201ENSMUST00000203862 478 ntBASIC5.32□□□□□ -1.56
Scn3aA2ASI5 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC5.32□□□□□ -1.56
Scn3aA2ASI5 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm11742-201ENSMUST00000119903 233 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm15120-201ENSMUST00000120602 301 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm23465-201ENSMUST00000157134 262 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm5252-201ENSMUST00000189030 909 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm3912-203ENSMUST00000211024 367 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm19095-201ENSMUST00000220533 730 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm24125-201ENSMUST00000104105 137 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm14352-201ENSMUST00000119250 449 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm3084-201ENSMUST00000169967 598 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm8069-201ENSMUST00000197887 154 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Scn3aA2ASI5 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm15745-201ENSMUST00000119807 115 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm18828-202ENSMUST00000181035 310 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm27611-201ENSMUST00000184690 108 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm5734-201ENSMUST00000189787 913 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm44474-201ENSMUST00000196525 127 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm6988-201ENSMUST00000222676 375 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 AC132112.1-201ENSMUST00000226354 505 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm6863-201ENSMUST00000052882 636 ntBASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Scn3aA2ASI5 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Scn3aA2ASI5 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms