Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H2afb2S4R1M3 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
H2afb2S4R1M3 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H2afb2S4R1M3 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H2afb2S4R1M3 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm25919-201ENSMUST00000104271 132 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm12931-201ENSMUST00000117046 324 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm13491-201ENSMUST00000118267 235 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm3267-201ENSMUST00000118671 473 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm13867-201ENSMUST00000120844 395 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm12854-201ENSMUST00000128518 297 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm6647-201ENSMUST00000170514 641 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm27849-201ENSMUST00000183673 125 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm8282-201ENSMUST00000187559 483 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm38217-201ENSMUST00000194358 910 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm43712-201ENSMUST00000198020 291 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm40692-201ENSMUST00000220411 491 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm19189-201ENSMUST00000221689 754 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm7665-201ENSMUST00000076710 297 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Gm23796-201ENSMUST00000084011 160 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.84□□□□□ -1.63
H2afb2S4R1M3 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H2afb2S4R1M3 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H2afb2S4R1M3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
H2afb2S4R1M3 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm26067-201ENSMUST00000103789 110 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Mir290a-201ENSMUST00000104627 83 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm11822-201ENSMUST00000119177 415 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm14520-201ENSMUST00000119258 387 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm12189-201ENSMUST00000119779 912 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm13489-201ENSMUST00000121234 971 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm13738-201ENSMUST00000122437 469 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm16345-201ENSMUST00000146065 158 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm23673-201ENSMUST00000157474 298 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm22730-201ENSMUST00000158085 171 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Mir7037-201ENSMUST00000184414 65 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm28389-201ENSMUST00000190090 697 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm17981-201ENSMUST00000191109 739 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm37355-201ENSMUST00000193345 606 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm43037-201ENSMUST00000196808 250 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gm43717-201ENSMUST00000198684 310 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 AC133517.2-201ENSMUST00000226820 690 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Mir31-201ENSMUST00000083474 106 ntBASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H2afb2S4R1M3 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.82□□□□□ -1.64
H2afb2S4R1M3 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms