Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm26365-201ENSMUST00000179177 94 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm10410-201ENSMUST00000180138 384 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm26898-201ENSMUST00000181678 384 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm26970-201ENSMUST00000182990 964 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Mir3473g-201ENSMUST00000183494 136 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm27679-201ENSMUST00000184612 84 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm38166-201ENSMUST00000191660 471 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm43033-201ENSMUST00000199682 425 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm44404-201ENSMUST00000203979 636 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm45870-201ENSMUST00000211269 601 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ddx56Q9D0R4 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm7079-201ENSMUST00000119726 171 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm11679-201ENSMUST00000121830 779 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm23430-201ENSMUST00000122490 314 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm26170-201ENSMUST00000158419 148 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm8807-201ENSMUST00000179328 492 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm27225-201ENSMUST00000183833 557 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm44463-201ENSMUST00000198895 137 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm43004-201ENSMUST00000201872 703 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm19880-201ENSMUST00000207731 318 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm8526-201ENSMUST00000079153 475 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ddx56Q9D0R4 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Gm14772-201ENSMUST00000116562 514 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ddx56Q9D0R4 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms