Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm13321-201ENSMUST00000117101 400 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm16106-201ENSMUST00000119187 294 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm13867-201ENSMUST00000120844 395 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm15171-201ENSMUST00000122191 334 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm23121-201ENSMUST00000157653 173 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Mir6344-201ENSMUST00000183462 104 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm8891-201ENSMUST00000198546 832 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Mir6994-201ENSMUST00000198985 73 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm43136-201ENSMUST00000200403 636 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm19201-201ENSMUST00000210127 778 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Rpa3Q9CQ71 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Rpa3Q9CQ71 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm14512-201ENSMUST00000117924 230 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm8874-201ENSMUST00000196826 286 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm43036-201ENSMUST00000200594 373 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm4602-201ENSMUST00000203198 308 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm44816-201ENSMUST00000206666 477 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm4574-201ENSMUST00000207804 542 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.08□□□□□ -1.6
Rpa3Q9CQ71 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm8129-201ENSMUST00000118230 213 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm23046-201ENSMUST00000158369 284 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm22940-201ENSMUST00000158560 155 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm8614-201ENSMUST00000182528 978 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm43717-201ENSMUST00000198684 310 ntBASIC5.07□□□□□ -1.6
Rpa3Q9CQ71 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms