Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 Gm22155-201ENSMUST00000083836 162 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 n-R5s46-201ENSMUST00000083960 116 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Use1Q9CQ56 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Use1Q9CQ56 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Use1Q9CQ56 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Use1Q9CQ56 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 Gm38029-201ENSMUST00000192669 2090 ntBASIC4.68□□□□□ -1.66
Use1Q9CQ56 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Use1Q9CQ56 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm8129-201ENSMUST00000118230 213 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm11409-201ENSMUST00000118621 403 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm14046-201ENSMUST00000119389 509 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm14619-201ENSMUST00000120480 168 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm23539-201ENSMUST00000157537 224 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm6055-201ENSMUST00000180532 378 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm9320-201ENSMUST00000184151 473 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Mir7687-201ENSMUST00000184722 59 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm28094-201ENSMUST00000185262 390 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm8241-201ENSMUST00000189286 816 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm29475-201ENSMUST00000190767 312 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm37681-201ENSMUST00000193880 727 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm9442-201ENSMUST00000194242 319 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Ighv1-44-201ENSMUST00000195597 352 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm2623-201ENSMUST00000199229 286 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm45200-201ENSMUST00000207434 919 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 AC157085.1-201ENSMUST00000216343 162 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.67□□□□□ -1.66
Use1Q9CQ56 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Use1Q9CQ56 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC133076.2-201ENSMUST00000227678 3532 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm23750-201ENSMUST00000104222 132 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm25363-201ENSMUST00000158850 245 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm3076-201ENSMUST00000161613 451 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm36638-201ENSMUST00000193295 400 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm18330-201ENSMUST00000199246 547 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm8999-201ENSMUST00000204951 969 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Olfr151-202ENSMUST00000221099 929 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Thoc7-209ENSMUST00000225325 765 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.66□□□□□ -1.66
Use1Q9CQ56 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Use1Q9CQ56 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms