Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm18672-201ENSMUST00000208035 270 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm17991-201ENSMUST00000208139 297 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm44754-201ENSMUST00000208155 400 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm31166-201ENSMUST00000209326 288 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm23623-201ENSMUST00000082461 107 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Gm23242-201ENSMUST00000083055 107 ntBASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Nkx6-1Q99MA9 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Nkx6-1Q99MA9 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 AC115891.1-201ENSMUST00000215798 1755 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm3943-201ENSMUST00000118606 718 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm6587-201ENSMUST00000120219 613 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm12607-201ENSMUST00000120724 493 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm14766-201ENSMUST00000121689 367 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm21729-201ENSMUST00000180058 664 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm21853-201ENSMUST00000180071 664 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm22917-201ENSMUST00000180116 110 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm29495-201ENSMUST00000189319 664 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm36985-201ENSMUST00000195595 379 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm35013-201ENSMUST00000197218 832 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm43315-201ENSMUST00000198120 313 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm44277-201ENSMUST00000205128 649 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm33601-201ENSMUST00000210001 961 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm4032-201ENSMUST00000210886 487 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm19154-201ENSMUST00000223330 940 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm16415-201ENSMUST00000080097 489 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Mir337-201ENSMUST00000083592 97 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.89□□□□□ -1.47
Nkx6-1Q99MA9 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms