Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm28936-201ENSMUST00000187153 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm29121-201ENSMUST00000187611 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28243-201ENSMUST00000187801 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28844-202ENSMUST00000187977 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm29058-201ENSMUST00000189510 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm29624-201ENSMUST00000190018 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28780-201ENSMUST00000190223 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28969-211ENSMUST00000190992 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28990-207ENSMUST00000191219 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm36468-201ENSMUST00000192119 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm37070-201ENSMUST00000193272 460 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm31572-201ENSMUST00000193341 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm30175-201ENSMUST00000194173 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm30858-201ENSMUST00000195516 615 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm44261-201ENSMUST00000203337 209 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm45777-201ENSMUST00000213009 301 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Mir338-201ENSMUST00000083666 98 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm9386-201ENSMUST00000095195 381 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.77□□□□□ -1.65
Lsm1Q8VC85 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm14575-201ENSMUST00000117210 560 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm15390-201ENSMUST00000120323 738 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm14619-201ENSMUST00000120480 168 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm23171-201ENSMUST00000157159 264 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm16318-201ENSMUST00000162402 601 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm8614-201ENSMUST00000182528 978 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Mir6400-201ENSMUST00000184870 92 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm36939-201ENSMUST00000194889 439 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm24207-201ENSMUST00000082781 108 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm25682-201ENSMUST00000083942 164 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Lsm1Q8VC85 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Gm9569-201ENSMUST00000187492 787 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Gm43382-201ENSMUST00000198954 838 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Gm7721-201ENSMUST00000200446 546 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Gm18215-201ENSMUST00000204429 798 ntBASIC4.75□□□□□ -1.65
Lsm1Q8VC85 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms