Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm20486-201ENSMUST00000101544 128 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm14220-201ENSMUST00000118114 449 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm11631-201ENSMUST00000119220 156 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm12244-201ENSMUST00000119500 291 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm14908-201ENSMUST00000120930 1286 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm26410-201ENSMUST00000157670 261 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm17137-202ENSMUST00000165729 957 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm37866-201ENSMUST00000191950 696 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm37599-201ENSMUST00000193067 489 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm44412-201ENSMUST00000203018 294 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm19182-201ENSMUST00000207139 577 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm45485-201ENSMUST00000211229 357 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 n-R5s3-201ENSMUST00000083879 112 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm13477-201ENSMUST00000121620 2687 ntBASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC6.16□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm23839-201ENSMUST00000116957 109 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm12833-201ENSMUST00000136112 477 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm25227-201ENSMUST00000158204 112 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm25907-201ENSMUST00000158486 125 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm16378-201ENSMUST00000179168 342 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm43794-201ENSMUST00000200971 692 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm44312-201ENSMUST00000203536 469 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm44091-201ENSMUST00000205212 649 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm44681-201ENSMUST00000208447 842 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm18587-201ENSMUST00000213736 841 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 AC115357.1-201ENSMUST00000227575 466 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Ccdc9Q8VC31 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.15□□□□□ -1.43
Ccdc9Q8VC31 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Ccdc9Q8VC31 Gm42736-201ENSMUST00000200723 1353 ntBASIC6.15□□□□□ -1.43
Ccdc9Q8VC31 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.15□□□□□ -1.43
Ccdc9Q8VC31 Gm37747-201ENSMUST00000193717 4003 ntBASIC6.15□□□□□ -1.43
Ccdc9Q8VC31 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Ccdc9Q8VC31 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Ccdc9Q8VC31 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms