Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm18258-201ENSMUST00000210413 542 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm38137-201ENSMUST00000193735 1401 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm16394-201ENSMUST00000117289 675 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm15058-201ENSMUST00000117689 458 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm14688-201ENSMUST00000119169 303 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm15799-201ENSMUST00000120899 289 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm25713-201ENSMUST00000158625 109 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm26828-201ENSMUST00000180640 172 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm18802-201ENSMUST00000186270 888 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Col6a6Q8C6K9 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm22819-201ENSMUST00000157445 303 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm3077-201ENSMUST00000165903 627 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm27688-201ENSMUST00000183634 91 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm27883-201ENSMUST00000183941 102 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm37495-201ENSMUST00000194590 264 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm9317-201ENSMUST00000197055 862 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm45628-201ENSMUST00000210849 274 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 AC121137.1-201ENSMUST00000225272 602 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Cmah-208ENSMUST00000224819 9482 ntBASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC4.31□□□□□ -1.72
Col6a6Q8C6K9 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm15772-201ENSMUST00000118533 438 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm42999-201ENSMUST00000198049 786 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm37248-201ENSMUST00000193576 3174 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm42535-201ENSMUST00000197312 1399 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm24935-201ENSMUST00000103770 110 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm42830-201ENSMUST00000196642 313 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm45343-201ENSMUST00000210452 828 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm6988-201ENSMUST00000222676 375 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Gm26165-201ENSMUST00000083791 138 ntBASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Col6a6Q8C6K9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms