Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC166344.2-201ENSMUST00000226747 374 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Gm24460-201ENSMUST00000082731 106 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Pcdh19Q80TF3 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm9496-201ENSMUST00000191295 1601 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm26002-201ENSMUST00000101915 107 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm23485-201ENSMUST00000104181 155 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm14772-201ENSMUST00000116562 514 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm22103-201ENSMUST00000116733 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm26475-201ENSMUST00000116769 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm23620-201ENSMUST00000116812 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25042-201ENSMUST00000116856 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25540-201ENSMUST00000116880 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm14050-201ENSMUST00000117052 346 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm15016-201ENSMUST00000117300 720 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm12442-201ENSMUST00000118372 338 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm6058-201ENSMUST00000154261 399 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25909-201ENSMUST00000157619 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm26162-201ENSMUST00000157793 132 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm23032-201ENSMUST00000157995 107 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm24853-201ENSMUST00000158026 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm17142-201ENSMUST00000164933 645 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm23550-201ENSMUST00000179003 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25123-201ENSMUST00000179154 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25353-201ENSMUST00000179366 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm22992-201ENSMUST00000179496 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm25892-201ENSMUST00000179867 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm10410-201ENSMUST00000180138 384 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm24092-201ENSMUST00000180257 121 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm26898-201ENSMUST00000181678 384 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Mir496b-201ENSMUST00000184935 113 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Olfr936-202ENSMUST00000216912 937 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 CT025680.1-201ENSMUST00000217375 375 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm3266-201ENSMUST00000217832 591 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 CT025552.2-201ENSMUST00000225497 317 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Pcdh19Q80TF3 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.29□□□□□ -1.4
Pcdh19Q80TF3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms