Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm24935-201ENSMUST00000103770 110 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm13755-201ENSMUST00000118509 305 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm14874-201ENSMUST00000118995 438 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm15754-201ENSMUST00000119191 478 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm14520-201ENSMUST00000119258 387 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm23211-201ENSMUST00000122717 308 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm25824-201ENSMUST00000157092 121 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm22895-201ENSMUST00000157508 308 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Prl-201ENSMUST00000018061 886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm20915-201ENSMUST00000191575 663 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm18944-201ENSMUST00000207672 643 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm44857-201ENSMUST00000208331 196 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm45636-201ENSMUST00000210497 1064 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm45628-201ENSMUST00000210849 274 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Clec2j-201ENSMUST00000032517 515 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm5471-201ENSMUST00000072732 337 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm22456-201ENSMUST00000082578 125 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Mir188-201ENSMUST00000083464 68 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC154681.1-201ENSMUST00000225876 1735 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ubfd1Q78JW9 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm12584-201ENSMUST00000117109 1105 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm11719-201ENSMUST00000119399 351 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm13924-201ENSMUST00000119899 486 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm15803-201ENSMUST00000120118 394 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm11759-201ENSMUST00000121742 464 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm11197-201ENSMUST00000145158 839 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm22916-201ENSMUST00000157616 119 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm27148-201ENSMUST00000185086 160 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm36986-201ENSMUST00000195320 353 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm33952-201ENSMUST00000197795 408 ntBASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Ubfd1Q78JW9 AC159472.1-201ENSMUST00000218178 463 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms