Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28943-201ENSMUST00000186187 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28736-201ENSMUST00000186257 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29401-201ENSMUST00000186690 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29178-204ENSMUST00000186784 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28589-201ENSMUST00000186991 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28936-201ENSMUST00000187153 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29121-201ENSMUST00000187611 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28243-201ENSMUST00000187801 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28844-202ENSMUST00000187977 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29058-201ENSMUST00000189510 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm29624-201ENSMUST00000190018 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28780-201ENSMUST00000190223 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28969-211ENSMUST00000190992 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28990-207ENSMUST00000191219 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm36468-201ENSMUST00000192119 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm31572-201ENSMUST00000193341 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm30175-201ENSMUST00000194173 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm30858-201ENSMUST00000195516 615 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm43160-201ENSMUST00000196453 421 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Mir5121-201ENSMUST00000198528 74 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 AC135353.1-201ENSMUST00000215330 630 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm7768-201ENSMUST00000222988 597 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm43421-201ENSMUST00000200044 2905 ntBASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim41Q5NCC3 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm38697-201ENSMUST00000198061 1746 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm37090-201ENSMUST00000195694 4105 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm22714-201ENSMUST00000116894 78 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm16205-201ENSMUST00000117720 1027 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm12755-201ENSMUST00000122297 282 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm11197-201ENSMUST00000145158 839 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm25065-201ENSMUST00000177914 132 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm25891-201ENSMUST00000180050 132 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm27409-201ENSMUST00000184727 80 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Trbv12-3-201ENSMUST00000192675 372 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm43513-201ENSMUST00000199779 1076 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm7832-201ENSMUST00000202613 880 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 BC049739-201ENSMUST00000202626 660 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm35558-203ENSMUST00000222264 204 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 AC154640.2-201ENSMUST00000226324 472 ntBASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim41Q5NCC3 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm23988-201ENSMUST00000117034 122 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm14867-201ENSMUST00000120156 866 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm14392-201ENSMUST00000120332 401 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm24059-201ENSMUST00000157493 312 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm23583-201ENSMUST00000158533 289 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm23568-201ENSMUST00000177960 92 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm24829-201ENSMUST00000179245 92 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm27006-201ENSMUST00000182218 943 ntBASIC11.25□□□□□ -0.61
Trim41Q5NCC3 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms