Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm12717-201ENSMUST00000118427 983 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm11631-201ENSMUST00000119220 156 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm21999-201ENSMUST00000165985 387 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm8874-201ENSMUST00000196826 286 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm42694-201ENSMUST00000196951 358 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm44184-201ENSMUST00000204290 132 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm44623-201ENSMUST00000207934 434 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 AC122295.1-201ENSMUST00000223476 388 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Upf3bQ3ULL6 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.21□□□□□ -1.57
Upf3bQ3ULL6 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Upf3bQ3ULL6 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Upf3bQ3ULL6 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.21□□□□□ -1.57
Upf3bQ3ULL6 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Upf3bQ3ULL6 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm8145-201ENSMUST00000118220 745 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm12704-201ENSMUST00000119789 464 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm15171-201ENSMUST00000122191 334 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm16259-201ENSMUST00000145241 553 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm37243-201ENSMUST00000193407 595 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm24166-201ENSMUST00000082724 135 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Upf3bQ3ULL6 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm14575-201ENSMUST00000117210 560 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm13787-201ENSMUST00000120422 168 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm12332-201ENSMUST00000121397 922 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm22530-201ENSMUST00000158820 118 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Mir7222-201ENSMUST00000183740 75 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm37614-201ENSMUST00000195645 210 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm43136-201ENSMUST00000200403 636 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm6261-201ENSMUST00000204707 760 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm3816-201ENSMUST00000209803 433 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Mir30b-201ENSMUST00000083542 96 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Upf3bQ3ULL6 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms