Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm44193-201ENSMUST00000204822 2523 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm43188-201ENSMUST00000200180 2160 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm24124-201ENSMUST00000104103 132 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm3077-201ENSMUST00000165903 627 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm6113-201ENSMUST00000180319 639 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm28011-201ENSMUST00000184097 175 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm21617-201ENSMUST00000188297 691 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC7.92□□□□□ -1.14
Col17a1Q07563 AC156952.1-201ENSMUST00000220361 793 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Mir199a-2-201ENSMUST00000093618 110 ntBASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col17a1Q07563 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col17a1Q07563 Gm38362-201ENSMUST00000192999 2064 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 AC154462.1-201ENSMUST00000228897 2260 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm24127-201ENSMUST00000104110 130 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm15388-201ENSMUST00000121578 726 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm14253-201ENSMUST00000122112 639 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm38150-201ENSMUST00000192996 452 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm42796-201ENSMUST00000199913 1087 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC7.91□□□□□ -1.14
Col17a1Q07563 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm4036-201ENSMUST00000220842 626 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 AC162934.3-201ENSMUST00000223015 841 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr1143-201ENSMUST00000090708 945 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm37914-201ENSMUST00000195317 2679 ntBASIC7.91□□□□□ -1.14
Col17a1Q07563 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col17a1Q07563 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC7.91□□□□□ -1.14
Col17a1Q07563 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm22936-201ENSMUST00000103955 126 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm24608-201ENSMUST00000104381 136 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm11406-201ENSMUST00000117418 484 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm13484-201ENSMUST00000120738 412 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm12322-201ENSMUST00000121605 389 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm15227-201ENSMUST00000121844 399 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm12885-201ENSMUST00000122246 328 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Mir6374-201ENSMUST00000184003 107 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm43708-201ENSMUST00000198857 961 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Igkv11-118-201ENSMUST00000199448 346 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm19617-201ENSMUST00000202977 308 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC7.9□□□□□ -1.14
Col17a1Q07563 AC069561.2-201ENSMUST00000217596 420 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm3086-202ENSMUST00000221248 310 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Col17a1Q07563 AC098742.1-201ENSMUST00000227945 373 ntBASIC7.9□□□□□ -1.14
Col17a1Q07563 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Col17a1Q07563 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col17a1Q07563 Gm14857-201ENSMUST00000117862 3185 ntBASIC7.9□□□□□ -1.15
Col17a1Q07563 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Col17a1Q07563 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Col17a1Q07563 Zscan4a-201ENSMUST00000210573 2279 ntBASIC7.9□□□□□ -1.15
Col17a1Q07563 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Col17a1Q07563 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms