Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm28149-201ENSMUST00000187102 378 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm18177-201ENSMUST00000188373 404 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm28768-201ENSMUST00000189034 378 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm37659-201ENSMUST00000194574 111 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm45032-201ENSMUST00000205375 520 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm45610-201ENSMUST00000209227 784 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 AC120347.1-201ENSMUST00000223326 1639 ntBASIC4.32□□□□□ -1.72
Nkx3-1P97436 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nkx3-1P97436 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm25537-201ENSMUST00000103851 109 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm22657-201ENSMUST00000104197 132 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm8202-201ENSMUST00000117682 310 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm11633-201ENSMUST00000118176 444 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm6542-201ENSMUST00000153606 772 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm23069-201ENSMUST00000158240 311 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm23354-201ENSMUST00000158426 104 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm24175-201ENSMUST00000158931 129 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm16114-201ENSMUST00000161930 300 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm16456-201ENSMUST00000174431 920 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm27266-201ENSMUST00000184521 123 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm27387-201ENSMUST00000184583 116 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm4412-201ENSMUST00000186660 433 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm28097-201ENSMUST00000187333 366 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm20954-201ENSMUST00000189078 644 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm8458-201ENSMUST00000196658 819 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Mir5121-201ENSMUST00000198528 74 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm18482-201ENSMUST00000202405 760 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm8999-201ENSMUST00000204951 969 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm19096-201ENSMUST00000209705 766 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm7128-201ENSMUST00000211639 533 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm7045-201ENSMUST00000221466 605 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Gm19786-201ENSMUST00000222589 580 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Snord59a-201ENSMUST00000082844 74 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC4.31□□□□□ -1.72
Nkx3-1P97436 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Nkx3-1P97436 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nkx3-1P97436 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.3□□□□□ -1.72
Nkx3-1P97436 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx3-1P97436 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Nkx3-1P97436 Gm14790-201ENSMUST00000117760 1293 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms